This tutorial shows you how to use Microsoft HPC Pack 2012 R2 and Azure to set up a small, hybrid high performance computing (HPC) cluster. The cluster will consist of an on-premises head node (a computer running the Windows Server operating system and HPC Pack) and some compute nodes you deploy on-demand as worker role instances in an Azure cloud service. You can then run compute jobs on the hybrid cluster.
This tutorial shows one approach, sometimes called cluster "burst to the cloud," to use scalable, on-demand compute resources in Azure to run compute intensive applications.
This tutorial assumes no prior experience with compute clusters or HPC Pack. It is intended only to help you deploy a hybrid compute cluster quickly for demonstration purposes. For considerations and steps to deploy a hybrid HPC Pack cluster at greater scale in a production environment, see the detailed guidance. If you want to set up an HPC Pack cluster entirely in Azure, see Microsoft HPC Pack in Azure VMs.
Azure offers a range of sizes for your compute resources, suitable for different workloads. For example, the A8 and A9 instances combine high performance and access to a low latency, high throughput application network needed for certain HPC applications. See About the A8, A9, A10, and A11 Compute Intensive Instances.
To complete this tutorial, you need an Azure account. If you don't have an account, you can create a free trial account in just a couple of minutes. For details, see Create an Azure account.
In addition, you need the following for this tutorial.
An on-premises computer that is running an edition of Windows Server 2012 R2 or Windows Server 2012. This computer will be the head node of the HPC cluster. If you are not already running Windows Server, you can download and install an evaluation version.
Installation files for HPC Pack 2012 R2, which is available free of charge. Download the latest version and copy the files to the head node computer or to a network location. Choose installation files in the same language as your installation of Windows Server.
A domain account with local Administrator permissions on the head node.
TCP connectivity on port 443 from the head node to Azure.
You first install Microsoft HPC Pack on an on-premises computer running Windows Server that will be the head node of the cluster.
Log on to the head node by using a domain account that has local Administrator permissions.
Start the HPC Pack Installation Wizard by running Setup.exe from the HPC Pack installation files.
On the HPC Pack 2012 R2 Setup screen, click New installation or add new features to an existing installation.
On the Microsoft Software User Agreement page, click Next.
On the Select Installation Type page, click Create a new HPC cluster by creating a head node, and then click Next.
The wizard runs several pre-installation tests. Click Next on the Installation Rules page if all tests pass. Otherwise, review the information provided and make any necessary changes in your environment. Then run the tests again or if necessary start the Installation Wizard again.
On the HPC DB Configuration page, make sure Head Node is selected for all HPC databases, and then click Next.
Accept default selections on the remaining pages of the wizard. On the Install Required Components page, click Install.
After the installation completes, uncheck Start HPC Cluster Manager and then click Finish. (You will start HPC Cluster Manager in a later step to complete the configuration of the head node.)
Use the Azure Management Portal to perform the following steps with your Azure subscription. These are needed so you can later deploy Azure nodes from the on-premises head node.
Upload a management certificate (needed for secure connections between the head node and the Azure services)
Create an Azure cloud service in which Azure nodes (worker role instances) will run
Create an Azure storage account
Also make a note of your Azure subscription ID, which you will need later. Find this in your Azure account information.
HPC Pack installs a self-signed certificate on the head node, called the Default Microsoft HPC Azure Management certificate, that you can upload as an Azure management certificate. This certificate is provided for testing purposes and proof-of-concept deployments.
From the head node computer, sign in to the Azure portal.
Click Settings, and then click Management Certificates.
On the command bar, click Upload.
Browse on the head node for the file C:\Program Files\Microsoft HPC Pack 2012\Bin\hpccert.cer. Then, click the Check button.
You will see Default HPC Azure Management in the list of management certificates.
For best performance, create the cloud service and the storage account in the same geographic region.
In the portal, on the command bar, click New.
Click Compute, click Cloud Service, and then click Quick Create.
Type a URL for the cloud service, and then click Create Cloud Service.
In the portal, on the command bar, click New.
Click Data Services, click Storage, and then click Quick Create.
Type a URL for the account, and then click Create Storage Account.
To use HPC Cluster Manager to deploy Azure nodes and to submit jobs, first perform some required cluster configuration steps.
On the head node, start HPC Cluster Manager. If the Select Head Node dialog box appears, click Local Computer. The Deployment To-do List appears.
Under Required deployment tasks, click Configure your network.
In the Network Configuration Wizard, select All nodes only on an enterprise network (Topology 5).
Click Next to accept default values on the remaining pages of the wizard. Then, on the Review tab, click Configure to complete the network configuration.
In the Deployment To-do List, click Provide installation credentials.
In the Installation Credentials dialog box, type the credentials of the domain account that you used to install HPC Pack. Then click OK.
In the Deployment To-do List, click Configure the naming of new nodes.
In the Specify Node Naming Series dialog box, accept the default naming series and click OK.
In the Deployment To-do List, click Create a node template. You will use the node template to add Azure nodes to the cluster.
In the Create Node Template Wizard, do the following:
a. On the Choose Node Template Type page, click Azure node template, and then click Next.
b. Click Next to accept the default template name.
c. On the Provide Subscription Information page, enter your Azure subscription ID (available in your Azure account information). Then, in Management certificate, click Browse and select Default HPC Azure Management. Then click Next.
d. On the Provide Service Information page, select the cloud service and the storage account that you created in a previous step. Then click Next.
e. Click Next to accept default values on the remaining pages of the wizard. Then, on the Review tab, click Create to create the node template.
You now use the node template to add Azure nodes to the cluster. Adding the nodes to the cluster stores their configuration information so that you can start (provision) them at any time as role instances in the cloud service. Your subscription only gets charged for Azure nodes after the role instances are running in the cloud service.
For this tutorial you will add two Small nodes.
In HPC Cluster Manager, in Node Management, in the Actions pane, click Add Node.
In the Add Node Wizard, on the Select Deployment Method page, click Add Azure nodes, and then click Next.
On the Specify New Nodes page, select the Azure node template you created previously (called by default Default AzureNode Template). Then specify 2 nodes of size Small, and then click Next.
For details about the available virtual machine sizes, see Virtual Machine and Cloud Service Sizes for Azure.
On the Completing the Add Node Wizard page, click Finish.
Two Azure nodes, named AzureCN-0001 and AzureCN-0002, now appear in HPC Cluster Manager. They are both in the Not-Deployed state.
When you want to use the cluster resources in Azure, use HPC Cluster Manager to start (provision) the Azure nodes and bring them online.
In HPC Cluster Manager, in Node Management, click one or both nodes and then, in the Actions pane, click Start.
In the Start Azure Nodes dialog box, click Start.
The nodes transition to the Provisioning state. You can view the provisioning log to track the provisioning progress.
After a few minutes, the Azure nodes finish provisioning and are in the Offline state. In this state the role instances are running but will not yet accept cluster jobs.
To confirm that the role instances are running, in the portal, click Cloud Services, click the name of your cloud service, and then click Instances.
You will see two worker role instances are running in the service. HPC Pack also automatically deploys two HpcProxy instances (size Medium) to handle communication between the head node and Azure.
To bring the Azure nodes online to run cluster jobs, select the nodes, right-click, and then click Bring Online.
HPC Cluster Manager indicates that the nodes are in the Online state.
You can use the HPC Pack clusrun command to run a command or application on one or more cluster nodes. As a simple example, use clusrun to get the IP configuration of the Azure nodes.
On the head node, open a command prompt.
Type the following command:
clusrun /nodes:azurecn* ipconfig
You will see output similar to the following.
You can submit a test job that runs on the hybrid cluster. This example is a simple "parametric sweep" job (a type of intrinsically parallel computation) which runs subtasks that add an integer to itself by using the set /a command. All the nodes in the cluster contribute to finishing the subtasks for integers from 1 to 100.
In HPC Cluster Manager, in Job Management, in the Actions pane, click New Parametric Sweep Job.
In the New Parametric Sweep Job dialog box, in Command line, type
set /a *+* (overwriting the default command line that appears). Leave default values for the remaining settings, and then click Submit to submit the job.
When the job is finished, double-click the My Sweep Task job.
Click View Tasks, and then click a subtask to view the calculated output of that subtask.
To see which node performed the calculation for that subtask, click Allocated Nodes. (Your cluster might show a different node name.)
After you try out the cluster, you can use HPC Cluster Manager to stop the Azure nodes to avoid unnecessary charges to your account. This stops the cloud service and removes the Azure role instances.
In HPC Cluster Manager, in Node Management, select both Azure nodes. Then, in the Actions pane, click Stop.
In the Stop Azure Nodes dialog box, click Stop.
The nodes transition to the Stopping state. After a few minutes, HPC Cluster Manager shows that the nodes are Not-Deployed.
To confirm that the role instances are no longer running in Azure, in the classic portal, click Cloud Services, click the name of your cloud service, and then click Instances. No instances will be deployed in the production environment.
This completes the tutorial.